subtom_prepare_ccmatrix
Calculates batch of pairwise comparisons of particles.
subtom_prepare_ccmatrix(
'all_motl_fn_prefix', all_motl_fn_prefix ('combinedmotl/allmotl'),
'ccmatrix_fn_prefix', ccmatrix_fn_prefix ('class/ccmatrix_pca'),
'iteration', iteration (1),
'num_ccmatrix_batch', num_ccmatrix_batch (1))
Figures out the pairwise comparisons to make from the motivelist given by
all_motl_fn_prefix and iteration, and breaks up these comparisons into
num_ccmatrix_batch batches for parallel computation. Each batch is written
out as an array with the ‘reference’ particle index and ‘target’ particle index
to an EM-file with the name described by ccmatrix_fn_prefix, iteration,
#, and ‘_pairs’ where the # is the batch index.
Example
subtom_prepare_ccmatrix(
'all_motl_fn_prefix', 'combinedmotl/allmotl', ...
'ccmatrix_fn_prefix', 'class/ccmatrix', ...
'iteration', 1, ...
'num_ccmatrix_batch', 1000);