subTOM
SubTOM - Subvolume processing scripts with the TOM toolbox is a collection of scripts form a pipeline for subvolume alignment and averaging of electron cryo-tomography data.
Table of Contents:
Links to Individual Script Documentation:
- Introduction
- subtom_alignment.sh
- subtom_average.sh
- subtom_bandpass.sh
- subtom_cat_motls.sh
- subtom_clean_motl.sh
- subtom_compare_motls.sh
- subtom_even_odd_motl.sh
- subtom_extract_noise.sh
- subtom_extract_subtomograms.sh
- subtom_maskcorrected_fsc.sh
- subtom_preprocess.sh
- subtom_random_subset_motl.sh
- subtom_plot_filter.sh
- subtom_plot_scanned_angles.sh
- subtom_reconstruct.sh
- subtom_renumber_motl.sh
- subtom_rotx_motl.sh
- subtom_scale_motl.sh
- subtom_scale_noisemotl.sh
- subtom_seed_positions.sh
- subtom_shape.sh
- subtom_split_motl_by_row.sh
- subtom_transform_motl.sh
- subtom_unclass_motl.sh
Links to Individual Function Documentation:
- Introduction
- subtom_bandpass.m
- subtom_cat_motls.m
- subtom_clean_motl.m
- subtom_compare_motls.m
- subtom_even_odd_motl.m
- subtom_extract_noise.m
- subtom_extract_subtomograms.m
- subtom_maskcorrected_fsc.m
- subtom_parallel_sums.m
- subtom_plot_filter.m
- subtom_plot_scanned_angles.m
- subtom_random_subset_motl.m
- subtom_renumber_motl.m
- subtom_rotx_motl.m
- subtom_scale_motl.m
- subtom_scan_angles_exact.m
- subtom_seed_positions.m
- subtom_shape.m
- subtom_split_motl_by_row.m
- subtom_transform_motl.m
- subtom_weighted_average.m
- subtom_unclass_motl.m
Classification Documentation:
Analysis Documentation: