subtom_parallel_sums_cls
Creates raw sums and Fourier weight sums in a batch.
subtom_parallel_sums_cls(
'all_motl_fn_prefix', all_motl_fn_prefix ('combinedmotl/allmotl'),
'ref_fn_prefix', ref_fn_prefix ('ref/ref'),
'ptcl_fn_prefix', ptcl_fn_prefix ('subtomograms/subtomo'),
'weight_fn_prefix', weight_fn_prefix ('otherinputs/ampspec'),
'weight_sum_fn_prefix, weight_sum_fn_prefix ('otherinputs/wei'),
'iteration', iteration (1),
'tomo_row', tomo_row (7),
'num_avg_batch', num_avg_batch (1),
'process_idx', process_idx (1))
Aligns a subset of particles using the rotations and shifts in
all_motl_fn_prefix _#.em where # corresponds to iteration in
num_avg_batch chunks to make a raw particle sum ref_fn_prefix _#_###.em
where # corresponds to iteration and ### corresponds to process_idx.
Fourier weight volumes with name prefix weight_fn_prefix will also be
aligned and summed to make a weight sum weight_sum_fn_prefix _#_###.em.
tomo_row describes which row of the motl file is used to determine the
correct tomogram fourier weight file. In this multi-reference version of
parallel sums, each unique value of iclass (row 20 in the motive list) will be
summed and written out (excluding non-positive values).
Example
subtom_parallel_sums_cls(...
'all_motl_fn_prefix', 'combinedmotl/allmotl', ...
'ref_fn_prefix', 'ref/ref', ...
'ptcl_fn_prefix', 'subtomograms/subtomo', ...
'weight_fn_prefix', 'otherinputs/ampspec', ...
'weight_sum_fn_prefix, 'otherinputs/wei', ...
'iteration', 1, ...
'tomo_row', 7, ...
'num_avg_batch', 1, ...
'process_idx', 1)