subTOM
stable

Table of Contents:

  • Installation
  • Conventions
  • Example Workflow

Links to Individual Script Documentation:

  • Introduction
  • subtom_alignment.sh
  • subtom_average.sh
  • subtom_bandpass.sh
  • subtom_cat_motls.sh
  • subtom_clean_motl.sh
  • subtom_compare_motls.sh
  • subtom_even_odd_motl.sh
  • subtom_extract_noise.sh
  • subtom_extract_subtomograms.sh
  • subtom_maskcorrected_fsc.sh
  • subtom_preprocess.sh
  • subtom_random_subset_motl.sh
  • subtom_plot_filter.sh
  • subtom_plot_scanned_angles.sh
  • subtom_reconstruct.sh
  • subtom_renumber_motl.sh
  • subtom_rotx_motl.sh
  • subtom_scale_motl.sh
  • subtom_scale_noisemotl.sh
  • subtom_seed_positions.sh
  • subtom_shape.sh
  • subtom_split_motl_by_row.sh
  • subtom_transform_motl.sh
  • subtom_unclass_motl.sh

Links to Individual Function Documentation:

  • Introduction
  • subtom_bandpass.m
  • subtom_cat_motls.m
  • subtom_clean_motl.m
  • subtom_compare_motls.m
  • subtom_even_odd_motl.m
  • subtom_extract_noise.m
  • subtom_extract_subtomograms.m
  • subtom_maskcorrected_fsc.m
  • subtom_parallel_sums.m
  • subtom_plot_filter.m
  • subtom_plot_scanned_angles.m
  • subtom_random_subset_motl.m
  • subtom_renumber_motl.m
  • subtom_rotx_motl.m
  • subtom_scale_motl.m
  • subtom_scan_angles_exact.m
  • subtom_seed_positions.m
  • subtom_shape.m
  • subtom_split_motl_by_row.m
  • subtom_transform_motl.m
  • subtom_weighted_average.m
  • subtom_unclass_motl.m

Classification Documentation:

  • General Utilities
  • MSA
  • Multireference
  • PCA
  • WMD

Analysis Documentation:

  • B-Factor from Subsets
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© Copyright 2021, Dustin Reed Morado. Revision 945e24a6.

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